BioBase.

DOI:10.18129 / b9.bioc.biobase.

这是发展Biobase版本;稳定的发布版本请参见BioBase.

生物碱:生物导体的基本功能

生物导体版本:开发(3.14)

许多其他包或替换R功能所需的功能。

作者:R. Gentleman,V. Carey,M. Morgan,S. Falcon

Maintainer: Bioconductor Package Maintainer < Maintainer at Bioconductor。org>

引文(从R中输入引用(“Biobase”)):

安装

要安装此包,请启动R(版本“4.1”)并输入:

如果(!requireNamespace("BiocManager", quiet = TRUE)) install.packages("BiocManager") #初始化使用BiocManager::install(version='devel') BiocManager::install("Biobase")

有关较旧版本的R,请参阅适当的Bioconductor释放

文档

要查看系统中安装的软件包版本的文档,请启动R并输入:

browseVignettes(“Biobase”)

PDF R脚本 生物碱基和表达集的介绍
PDF R脚本 esApply介绍
PDF R脚本 eSet开发人员注意事项2021欧洲杯体育投注开户
PDF 参考手册
文本 消息

细节

biocViews 基础设施软件
版本 2.53.0
Bioconductor自 BIOC 1.6(R-2.1)或更早(> 16年)
许可证 艺术- 2.0
取决于 R (> = 2.10),BiocGenerics(> = 0.27.1),UILS
进口 方法
链接
建议 工具,tkWidgets, 全部,RUnit,golubesets.
系统要求
增强了
URL //www.andersvercelli.com/packages/Biobase
Bugreports. https://github.com/bioconductor/biobase/issues.
取决于我 ACME敬服affycompaffyContamaffycoretoolsaffyPLMAGDEXAgiMicroRna目的altcdfenvsannaffyAnnotationDbiAnnotationForgeArrayExpressarrayMvout自动调谐Beadarray.beadarraysnp.bgxBicAREbigmelon生物派BiomVccClass.Bioqc.biosigner布尔玛脑创意相机cancerclass卡斯珀类别CompoundationCompare.ccpromise.cellHTS2CGHbaseCGHcallCGHregionsclippdaclusterStabCMAcn.farmsCodelink.转换COPAcovEBcovRNADexseq.DFPdiggitDOPPELGANGR.DSS二元人士染料纤维ebarrays.EDASeq边缘EGSEA.Epigenomix.Epivizrdata.ExiMiR表达式法比亚factDesignfastsegflowBeadsfrma.加格GeneAnswersGeneMetaGeneplotter.geneRecommenderGeneRegionScangeneselectmmd.geNetClassifier地理曲线goexpress.Goprofiles.GOstatsGSEABASE.GSEABenchmarkeRGSEALMGWASToolsHapfabia.帮助hopachHTqPCRHybridMTestiBMQiCheckIdeoVizIdiogram.InPAS检查等压线迭代拍摄iva光民马特制作4.mAPKLmassiR一顿饭metabomxtrMetagenomeSQ.metavizr甲基弥撒MfuzzMiChipmicrobiomeexplorer.mimager含羞草雷尼卡幻影Mircomp.ml interfacesmmdiff2.单片msnbase.Mulcom多atAdataset.Multtest.NanoStringDiffNanostringNctools.NOISeqnondetectsnormalize450K诺斯QPCR.益生元omicRexposomeOrderedListotubase.PADOGpandaRPANP.pcaMethodspdInfoBuilderpepStat现象PLPEPOWSC预先pRolocGUI承诺qpcrNormqPLEXanalyzerR453Plus1ToolboxRbcBook1rbsurv.rcellminerReadqPCRrefplus.rexposome.林格Risa.rmagpie.RnitsroplsRTCARTopperRUVSeq安全的scan.upc.SeqGSEAsigcheck.siggenes.singleCellTKspecspspktools.泼丝体Strome4.概括分析TDARACNEtigretilingArraytopGO泛太平洋伙伴关系tRanslatometspair《暮光之城》撤销variancepartition.VEGMC毒蛇vsn西瓜webbiocXDE.
进口我 a4Basea4ClassifA4Core.a4preproc.abarray.王牌aCGHadSplityefyilm.AgiMicroRna曾帮工annmap注释annotationhubdata.annotationToolsArrayExpressHTSarrayQualityMetrics吸引舞会礼服基本BayesKnockdownBgeeDBbiobroombioCancerbiocViews生命网络biscuiteerBiSeq宝石bnem脑创意BSSeq.Bubbletree.咖啡馆癌症红衣主教CellScore蜂窝线chnnormaliter.chipqc.ChIPXpressChromheatMap.chromswitch西塞罗限幅器Clumsid.cn.mops可可coexnet.cogena结合conclus共识共识consensusOV警戒线CoreGxcrlmmcrossmetactggem.腹带cyanoFilter周期Cydar.cytoml.CytoTreeDAPARddCtdebCAM德科重新评估DESeq2命运DExMAdiffloop不和谐easyRNASeqebarrays.ecolitk天哪enmix.Ensembldb.erma.esetVisExiMiRexomePeak2农场FFPE.FindMyFriends流通flowCoreflowFPflowMatchflowMeansflowSpecsflowStatsflowUtilsflowVizFlowWorkspace.弗雷泽frma.Frmatools.GAPGOMgCrisprToolsGcrma.GCSscoreGenBankr.geneClassifiersgeneexpressionsignaturegenefilterGeneMetageneRecommenderGeneRegionScan创世纪GenomicFeaturesGenomicInteractions基因组织GenomicSuperSignature地理交汇GEOsubmissiongep2pep.gespeRggbioGirafe.GISPAGlobalAncovaglobaltestGMAPR.GSRIGSVAGVIZ.HarshlightHTqPCRHTSFilterimageHTSImmuneSpaceRinfinityFlowInTADIsoformSwitchAnalyzeRIsoGeneGUIIsomirs.迭代kissDELapmix.液晶硅类别lrbasedbi.Maanova.魔法杂色makecdfenv.masigpro.桅杆mBPCRMeSHDbiMETASEQR2.METHYLAID.Methylcc.弥撒mfaMiChipmicrobiomeDASimMIGSAminfiMinimumDistanceMiPP米拉miRSMmissMethylMLSeqMMAPPR2mogsamoonlightr.mosimmsnid.MultiAsaySayexperiment.多股票mzRnanostringqcpro.ncdfflow.armanalyzerde.npGSEA核核酸oligoClassesomicade4ontoproc.opencyto.挥之不忘opparOrganismdbi.PANP.phantasusPharmacogx.phemd文学钢琴plethyplgem钳子podkatppiStatsprebs王子概要挑战后代ProMoC.承诺道具ProteomicsAnnotationHubDataPSEApsygenet2rptairMS彪马pvacpvcapwOmicsqcmetricsQDNASEQ.qfeatures.qpgraphQuantiseqr.quantroQuasRqusageradiogx.randPackReportingToolsrestfulSERGalaxyrmagpie.rmassbank.RNAinteract的方式腐烂RpsiXMLrqubic.rScudoRTPCA.rtreemix.RUVnormalizeSCMAP.scTGIFSeqVarTools缩短SigsPacksigsquared.simbindprofiles.singscoreSitadela.SLGISomaticSignaturesspktools.海绵议案潜艇扳机TEQCTFBStools.时间课程TMixClust三硝基甲苯topdownr毒素TRADESEQ.ttmap.《暮光之城》的作用香草VariantAnnotation变型滤波器Varianttools.vidger.火神西瓜个字xcmsXeva
建议我 AUCellBiocCheckBiocGenericsBiocOncoTKBSgenomeCellMappercellTreeclustCompcoseqcountblust.dcanrdearseqedger.enmcb.EpiDISHepivizrepivizrChartepivizrStandalone农场Genefu.GENIE3Genomicranges.GSARGSGalgor.Heatplus互动神血烤肉串莱斯limmaM3Drop.mCSEA墨西拿MSA.multiClustOSATPCAtoolspkgDepToolspRcisTargetreactomegsa.中华民国RTCGA撒尿scmeth食物SeqArray紧身的spatialHeatmapstager.survcompTargetScoreTCGAbiolinksTFutilsTimeSeriesexperiment.tkWidgetsTypeInfovbmpwidgetTools
链接给我
建立报告

包档案

遵循2021年欧洲杯比分预测 在R会话中使用这个包的说明。

源包 biobase_2.53.0.tar.gz.
Windows二进制文件 Biobase_2.53.0.zip(32位和64位)
Macos 10.13(高塞拉) Biobase_2.53.0.tgz
源库 git克隆https://git.bioconductor.org/packages/Biobase
源存储库(开发人员访问) git clone git@git.biocondion.org:包/生物酶
包短网址 //www.andersvercelli.com/packages/Biobase/
包下载报告 下载统计信息

文档»

Bioconductor

R/凹口包和文档

支持»

请阅读张贴指南.将有关Bioconductor的问题张贴到以下地点之一:

  • 支持网站- 关于生物导体包的问题
  • Bioc-devel.邮件列表-为包开发人员2021欧洲杯体育投注开户