多个平台构建/检查报告BioC 3.16
一个 B C D E F G H J K l N O P R (年代] T U V W X Y Z

这个页面生成于-0400年2022-08-09 11:08:44(星期二,09年2022年8月)。

主机名 操作系统 拱(*) R版本 安装的包裹
nebbiolo2 Linux (Ubuntu 20.04.4 LTS) x86_64 4.2.1(2022-06-23)准备——“滑稽的孩子” 4374年
palomino4 Windows Server 2022数据中心 x64 4.2.1(2022-06-23准备ucrt)——“滑稽的孩子” 4158年
lconway macOS 12.2.1蒙特利 x86_64 4.2.1修补准备(2022-07-09 r82577)——“滑稽的孩子” 4158年
点击任何主机名看到更多的信息系统(如编译器)(*)报道的uname - p”,除了在Windows和Mac OS X

检查结果SpidermiR lconway


的开发人员/维2021欧洲杯体育投注开户护者SpidermiR包:
——请允许24小时(有时是48小时)为您的最新推到git@git.bioconductor.org:包/ SpidermiR.git
反思这一报告。看到如何以及何时builder拉吗?当我的更改传播吗?为更多的信息。
——确保使用以下设置为了复制任何错误或警告你看到这个页面上。

生的结果

1902年/ 2139 主机名 OS /拱 安装 构建 检查 构建本
SpidermiR1.27.0(着陆页)
克劳迪娅静脉
快照日期:-0400 14:00:04 2022-08-08(星期一,2022年8月08)
git_url:https://git.bioconductor.org/packages/SpidermiR
git_branch:
git_last_commit:12399 cf
git_last_commit_date:-0400 2022-04-26 11:30:19(星期二,2022年4月26日)
nebbiolo2 Linux (Ubuntu 20.04.4 LTS) / x86_64 好吧 好吧 好吧 不必要的,相同版本已经出版
palomino4 Windows Server 2022数据中心/ x64 好吧 好吧 错误 好吧
lconway macOS 12.2.1蒙特利/ x86_64 好吧 好吧 好吧 好吧 不必要的,相同版本已经出版

总结

:SpidermiR
版本:1.27.0
命令:/图书馆/框架/ R.framework /资源/ bin / R CMD检查——安装=检查:SpidermiR.install-out。txt -库= /图书馆/框架/ R.framework——no-vignettes计时SpidermiR_1.27.0.tar.gz /资源/库
StartedAt-0400:2022-08-08 23:12:16 (Mon, 08年8月2022)
EndedAt-0400:2022-08-08 23:16:26 (Mon, 08年8月2022)
EllapsedTime:250.1秒
RetCode:0
状态:好吧
CheckDir:SpidermiR.Rcheck
警告:0

命令输出

# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #运行命令:# # # # # # /图书馆/框架/ R.framework /资源/ bin / R CMD检查——安装=检查:SpidermiR.install-out。txt -库= /图书馆/框架/ R.framework——no-vignettes计时SpidermiR_1.27.0.tar.gz /资源/库### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.16-bioc/meat/SpidermiR.Rcheck’ * using R version 4.2.1 Patched (2022-07-09 r82577) * using platform: x86_64-apple-darwin17.0 (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘SpidermiR/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘SpidermiR’ version ‘1.27.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘SpidermiR’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... NOTE Namespaces in Imports field not imported from: ‘MAGeCKFlute’ ‘TCGAbiolinks’ ‘ggplot2’ ‘gplots’ ‘grDevices’ ‘gridExtra’ ‘lattice’ ‘latticeExtra’ All declared Imports should be used. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed SpidermiRdownload_miRNAprediction 5.562 2.077 10.854 SpidermiRdownload_miRNAvalidate 4.558 0.260 24.932 SpidermiRdownload_drug_gene 1.533 0.072 7.679 * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/Users/biocbuild/bbs-3.16-bioc/meat/SpidermiR.Rcheck/00check.log’ for details.

安装输出

SpidermiR.Rcheck / 00 install.out

# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #运行命令:# # # # # # /图书馆/框架/ R.framework /资源/ bin / R CMD安装SpidermiR # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # *安装库' /图书馆/框架/ R.framework /版本/ 4.2 /资源/库的安装源* * *包“SpidermiR”……* *使用了安装* * R * *学院* * byte-compile为延迟加载和准备包* *帮助安装帮助指数* * * * *建筑包指数* *测试如果安装包可以从临时位置* *加载测试如果安装包可以从最终位置* *加载测试如果安装包保存记录的临时安装路径* (SpidermiR)完成

测试输出


例子计时

SpidermiR.Rcheck / SpidermiR-Ex.timings

的名字 用户 系统 运行
SpidermiRanalyze_degree_centrality 0.004 0.001 0.014
SpidermiRanalyze_direct_net 0.004 0.000 0.005
SpidermiRanalyze_direct_subnetwork 0.007 0.001 0.013
SpidermiRanalyze_subnetwork_neigh 0.394 0.003 0.532
SpidermiRdownload_drug_gene 1.533 0.072 7.679
SpidermiRdownload_miRNAextra_cir 0.080 0.006 4.108
SpidermiRdownload_miRNAprediction 5.562 2.077 10.854
SpidermiRdownload_miRNAvalidate 4.558 0.260 24.932
SpidermiRdownload_net 0.243 0.022 1.583
SpidermiRprepare_NET 0.778 0.032 1.445
SpidermiRquery_disease 0.877 0.029 4.056
SpidermiRquery_networks_type 0.016 0.002 0.586
SpidermiRquery_spec_networks 0.167 0.008 0.447
SpidermiRquery_species 0.010 0.001 0.190